Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HS3ST4Q9Y661 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21■□□□□ 0.95
HS3ST4Q9Y661 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HS3ST4Q9Y661 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21■□□□□ 0.95
HS3ST4Q9Y661 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HS3ST4Q9Y661 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HS3ST4Q9Y661 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HS3ST4Q9Y661 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
HS3ST4Q9Y661 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 C2orf69P4-201ENST00000565394 541 ntBASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HS3ST4Q9Y661 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
HS3ST4Q9Y661 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HS3ST4Q9Y661 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HS3ST4Q9Y661 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HS3ST4Q9Y661 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HS3ST4Q9Y661 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HS3ST4Q9Y661 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HS3ST4Q9Y661 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HS3ST4Q9Y661 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HS3ST4Q9Y661 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HS3ST4Q9Y661 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HS3ST4Q9Y661 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HS3ST4Q9Y661 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HS3ST4Q9Y661 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.95■□□□□ 0.94
HS3ST4Q9Y661 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.94■□□□□ 0.94
HS3ST4Q9Y661 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HS3ST4Q9Y661 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HS3ST4Q9Y661 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HS3ST4Q9Y661 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HS3ST4Q9Y661 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.94■□□□□ 0.94
HS3ST4Q9Y661 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms