Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AF186192.3-201ENST00000583427 947 ntBASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 CD177P1-201ENST00000606252 935 ntBASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 KRT16P5-201ENST00000455284 522 ntBASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPBQ9Y5S2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDC42BPBQ9Y5S2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC31.09■■■□□ 2.57
CDC42BPBQ9Y5S2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDC42BPBQ9Y5S2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
CDC42BPBQ9Y5S2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC31.09■■■□□ 2.57
CDC42BPBQ9Y5S2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CDC42BPBQ9Y5S2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 MIR6786-201ENST00000616843 113 ntBASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPBQ9Y5S2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
CDC42BPBQ9Y5S2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CDC42BPBQ9Y5S2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC31.07■■■□□ 2.56
CDC42BPBQ9Y5S2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
CDC42BPBQ9Y5S2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CDC42BPBQ9Y5S2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC31.07■■■□□ 2.56
CDC42BPBQ9Y5S2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC31.07■■■□□ 2.56
CDC42BPBQ9Y5S2 AL121906.2-201ENST00000621597 723 ntBASIC31.07■■■□□ 2.56
CDC42BPBQ9Y5S2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDC42BPBQ9Y5S2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CDC42BPBQ9Y5S2 TMPOP1-202ENST00000424642 1267 ntBASIC31.06■■■□□ 2.56
CDC42BPBQ9Y5S2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC31.06■■■□□ 2.56
CDC42BPBQ9Y5S2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC31.06■■■□□ 2.56
CDC42BPBQ9Y5S2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC31.06■■■□□ 2.56
CDC42BPBQ9Y5S2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CDC42BPBQ9Y5S2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 MIR2861-201ENST00000636310 90 ntBASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
CDC42BPBQ9Y5S2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 AL353807.1-201ENST00000427475 662 ntBASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 REXO1L10P-201ENST00000615707 1290 ntBASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 SAPCD2P4-201ENST00000424595 1171 ntBASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPBQ9Y5S2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 KRT18P35-201ENST00000510488 1269 ntBASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC31.03■■■□□ 2.56
CDC42BPBQ9Y5S2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CDC42BPBQ9Y5S2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC31.02■■■□□ 2.56
CDC42BPBQ9Y5S2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC31.02■■■□□ 2.56
CDC42BPBQ9Y5S2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDC42BPBQ9Y5S2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDC42BPBQ9Y5S2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CDC42BPBQ9Y5S2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
CDC42BPBQ9Y5S2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CDC42BPBQ9Y5S2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CDC42BPBQ9Y5S2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms