Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 MIPEPP3-201ENST00000412105 444 ntBASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 AL356652.1-201ENST00000615962 565 ntBASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.6■□□□□ 0.89
RAI2Q9Y5P3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 KRT17P1-201ENST00000399211 1546 ntBASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 BX276092.2-201ENST00000417668 665 ntBASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 KRT8P36-201ENST00000489121 1440 ntBASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RAI2Q9Y5P3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAI2Q9Y5P3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAI2Q9Y5P3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAI2Q9Y5P3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAI2Q9Y5P3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAI2Q9Y5P3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RAI2Q9Y5P3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAI2Q9Y5P3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAI2Q9Y5P3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAI2Q9Y5P3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RAI2Q9Y5P3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAI2Q9Y5P3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 LSM12P1-201ENST00000411836 588 ntBASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 AL589743.5-201ENST00000616611 1050 ntBASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAI2Q9Y5P3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAI2Q9Y5P3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAI2Q9Y5P3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAI2Q9Y5P3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.56■□□□□ 0.88
RAI2Q9Y5P3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAI2Q9Y5P3 POU5F1P3-201ENST00000428824 1078 ntBASIC20.56■□□□□ 0.88
RAI2Q9Y5P3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.56■□□□□ 0.88
RAI2Q9Y5P3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.56■□□□□ 0.88
RAI2Q9Y5P3 AC105020.6-201ENST00000621523 1217 ntBASIC20.56■□□□□ 0.88
RAI2Q9Y5P3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.55■□□□□ 0.88
RAI2Q9Y5P3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms