Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA7Q9Y5G6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA7Q9Y5G6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA7Q9Y5G6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA7Q9Y5G6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDHGA7Q9Y5G6 AC120498.10-201ENST00000621827 505 ntBASIC20.16■□□□□ 0.82
PCDHGA7Q9Y5G6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGA7Q9Y5G6 AP006587.3-201ENST00000525742 1516 ntBASIC20.16■□□□□ 0.82
PCDHGA7Q9Y5G6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGA7Q9Y5G6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 PRORSD1P-201ENST00000295112 541 ntBASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 AC006128.1-201ENST00000624704 1661 ntBASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA7Q9Y5G6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHGA7Q9Y5G6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.14■□□□□ 0.82
PCDHGA7Q9Y5G6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 AC093787.1-201ENST00000450396 207 ntBASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA7Q9Y5G6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 AL162412.1-201ENST00000567129 965 ntBASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 AC016405.3-201ENST00000607710 860 ntBASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 AC008175.2-201ENST00000612840 297 ntBASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA7Q9Y5G6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA7Q9Y5G6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms