Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 FAM21FP-204ENST00000608637 956 ntBASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 AC010980.2-201ENST00000587099 1412 ntBASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB11Q9Y5F2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHB11Q9Y5F2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 AC091874.3-201ENST00000512672 1195 ntBASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 AC083880.1-201ENST00000608266 535 ntBASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB11Q9Y5F2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
PCDHB11Q9Y5F2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 RPS2P52-201ENST00000469610 820 ntBASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 AC006058.3-201ENST00000606217 1069 ntBASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 MYC-209ENST00000641252 345 ntBASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB11Q9Y5F2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 LSM12P1-201ENST00000411836 588 ntBASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 AL158047.1-201ENST00000445918 881 ntBASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHB11Q9Y5F2 AL157384.1-201ENST00000445995 2473 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms