Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4S1Q9Y587 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
AP4S1Q9Y587 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 AC239859.2-201ENST00000444165 318 ntBASIC19.2■□□□□ 0.66
AP4S1Q9Y587 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 AC092171.4-201ENST00000609130 632 ntBASIC19.2■□□□□ 0.66
AP4S1Q9Y587 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4S1Q9Y587 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 SMUG1P1-201ENST00000590640 811 ntBASIC19.19■□□□□ 0.66
AP4S1Q9Y587 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.19■□□□□ 0.66
AP4S1Q9Y587 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.18■□□□□ 0.66
AP4S1Q9Y587 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4S1Q9Y587 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms