Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 AC027612.3-201ENST00000413684 1047 ntBASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 DUX4L2-201ENST00000561772 1275 ntBASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 DUX4L6-201ENST00000626483 1275 ntBASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 DUX4L1-201ENST00000627662 1275 ntBASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 DUX4L8-201ENST00000629013 1275 ntBASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 DUX4L3-201ENST00000630187 1275 ntBASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 DUX4L7-201ENST00000630678 1275 ntBASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 DUX4L5-201ENST00000630834 1275 ntBASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAF6Q9Y4K3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 AP001160.3-201ENST00000601484 763 ntBASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 AC104187.1-201ENST00000607510 612 ntBASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TRAF6Q9Y4K3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 LINC02228-203ENST00000641970 1355 ntBASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAF6Q9Y4K3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRAF6Q9Y4K3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRAF6Q9Y4K3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRAF6Q9Y4K3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.77■□□□□ 0.75
TRAF6Q9Y4K3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.77■□□□□ 0.75
TRAF6Q9Y4K3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF6Q9Y4K3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms