Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RNF11Q9Y3C5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RNF11Q9Y3C5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 MIR6821-201ENST00000617625 74 ntBASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RNF11Q9Y3C5 AL512408.1-201ENST00000569378 2000 ntBASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 PCDHAC2-203ENST00000615316 3011 ntBASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 AC087289.5-201ENST00000586076 3175 ntBASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF11Q9Y3C5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF11Q9Y3C5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 MIR2861-201ENST00000636310 90 ntBASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 MYCNOS-205ENST00000641950 531 ntBASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF11Q9Y3C5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms