Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
SHANK2Q9UPX8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SHANK2Q9UPX8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SHANK2Q9UPX8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SHANK2Q9UPX8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC30.53■■■□□ 2.48
SHANK2Q9UPX8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SHANK2Q9UPX8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SHANK2Q9UPX8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC30.53■■■□□ 2.48
SHANK2Q9UPX8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SHANK2Q9UPX8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC30.53■■■□□ 2.48
SHANK2Q9UPX8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SHANK2Q9UPX8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SHANK2Q9UPX8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SHANK2Q9UPX8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 AL390719.1-204ENST00000412397 1219 ntBASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 AL117328.2-201ENST00000624617 1940 ntBASIC30.52■■■□□ 2.48
SHANK2Q9UPX8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC30.51■■■□□ 2.48
SHANK2Q9UPX8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SHANK2Q9UPX8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
SHANK2Q9UPX8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
SHANK2Q9UPX8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
SHANK2Q9UPX8 RARRES2P10-201ENST00000564312 460 ntBASIC30.51■■■□□ 2.48
SHANK2Q9UPX8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC30.51■■■□□ 2.48
SHANK2Q9UPX8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.48
SHANK2Q9UPX8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC30.51■■■□□ 2.47
SHANK2Q9UPX8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC30.51■■■□□ 2.47
SHANK2Q9UPX8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SHANK2Q9UPX8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC30.51■■■□□ 2.47
SHANK2Q9UPX8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 AC012676.1-201ENST00000574705 1949 ntBASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 AC110285.5-201ENST00000611501 352 ntBASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 AL049637.2-201ENST00000641778 930 ntBASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
SHANK2Q9UPX8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 PTBP1P-201ENST00000554374 1601 ntBASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
SHANK2Q9UPX8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 BX088651.1-201ENST00000540551 451 ntBASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 AC113410.3-201ENST00000623366 203 ntBASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SHANK2Q9UPX8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 Six3os1_6.1-201ENST00000620790 196 ntBASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms