Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 CYP2D8P-201ENST00000433633 1490 ntBASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 WWOX-216ENST00000569818 525 ntBASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 AC087742.1-201ENST00000575880 1738 ntBASIC24.82■■□□□ 1.56
ZC3H4Q9UPT8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 UPK3BP1-201ENST00000428678 509 ntBASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ZC3H4Q9UPT8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 NBPF21P-201ENST00000425093 1451 ntBASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZC3H4Q9UPT8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 AC116562.2-201ENST00000507042 360 ntBASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ZC3H4Q9UPT8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3H4Q9UPT8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3H4Q9UPT8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZC3H4Q9UPT8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC24.78■■□□□ 1.56
ZC3H4Q9UPT8 KRT126P-201ENST00000549467 1181 ntBASIC24.78■■□□□ 1.56
ZC3H4Q9UPT8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC24.78■■□□□ 1.56
ZC3H4Q9UPT8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 AC006011.2-201ENST00000621313 1158 ntBASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZC3H4Q9UPT8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZC3H4Q9UPT8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
ZC3H4Q9UPT8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZC3H4Q9UPT8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms