Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 AC245052.3-201ENST00000450182 901 ntBASIC18.11■□□□□ 0.49
COPS3Q9UNS2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 KRT16P2-201ENST00000414673 1423 ntBASIC18.1■□□□□ 0.49
COPS3Q9UNS2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPS3Q9UNS2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.09■□□□□ 0.49
COPS3Q9UNS2 SMG8-203ENST00000578922 2178 ntBASIC18.08■□□□□ 0.49
COPS3Q9UNS2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COPS3Q9UNS2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPS3Q9UNS2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.08■□□□□ 0.49
COPS3Q9UNS2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
COPS3Q9UNS2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPS3Q9UNS2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 AC010141.2-201ENST00000452426 721 ntBASIC18.08■□□□□ 0.48
COPS3Q9UNS2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 MIR2861-201ENST00000636310 90 ntBASIC18.08■□□□□ 0.48
COPS3Q9UNS2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
COPS3Q9UNS2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms