Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA7Q9UN72 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA7Q9UN72 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHA7Q9UN72 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA7Q9UN72 KRT19P1-201ENST00000405746 1186 ntBASIC23.14■■□□□ 1.29
PCDHA7Q9UN72 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHA7Q9UN72 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHA7Q9UN72 UBE2DNL-204ENST00000602536 740 ntBASIC23.14■■□□□ 1.29
PCDHA7Q9UN72 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA7Q9UN72 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA7Q9UN72 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.14■■□□□ 1.29
PCDHA7Q9UN72 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA7Q9UN72 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHA7Q9UN72 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHA7Q9UN72 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHA7Q9UN72 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA7Q9UN72 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms