Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.84■□□□□ 0.61
TMCC3Q9ULS5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMCC3Q9ULS5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMCC3Q9ULS5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMCC3Q9ULS5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TMCC3Q9ULS5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.84■□□□□ 0.61
TMCC3Q9ULS5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
TMCC3Q9ULS5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.84■□□□□ 0.61
TMCC3Q9ULS5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TMCC3Q9ULS5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMCC3Q9ULS5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMCC3Q9ULS5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TMCC3Q9ULS5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 PBX2P1-201ENST00000493219 1291 ntBASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.83■□□□□ 0.6
TMCC3Q9ULS5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMCC3Q9ULS5 AL158211.5-201ENST00000623583 2518 ntBASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMCC3Q9ULS5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 RASA4CP-201ENST00000424092 1398 ntBASIC18.8■□□□□ 0.6
TMCC3Q9ULS5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 EDA-201ENST00000338901 1233 ntBASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 AC245052.3-201ENST00000450182 901 ntBASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms