Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 AC012414.1-201ENST00000556676 535 ntBASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 AL355001.2-201ENST00000620617 1191 ntBASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.4■□□□□ 0.7
NIPSNAP3AQ9UFN0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NIPSNAP3AQ9UFN0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NIPSNAP3AQ9UFN0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NIPSNAP3AQ9UFN0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NIPSNAP3AQ9UFN0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 AC091305.1-201ENST00000479476 895 ntBASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.39■□□□□ 0.69
NIPSNAP3AQ9UFN0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 MIR939-201ENST00000401314 82 ntBASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 AC245052.3-201ENST00000450182 901 ntBASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPSNAP3AQ9UFN0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 AC079140.4-201ENST00000507448 529 ntBASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 TPRG1LP1-201ENST00000598702 760 ntBASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NIPSNAP3AQ9UFN0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NIPSNAP3AQ9UFN0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NIPSNAP3AQ9UFN0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPSNAP3AQ9UFN0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NIPSNAP3AQ9UFN0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.36■□□□□ 0.69
NIPSNAP3AQ9UFN0 AL354811.1-201ENST00000610286 706 ntBASIC19.36■□□□□ 0.69
NIPSNAP3AQ9UFN0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NIPSNAP3AQ9UFN0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.36■□□□□ 0.69
NIPSNAP3AQ9UFN0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPSNAP3AQ9UFN0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.36■□□□□ 0.69
NIPSNAP3AQ9UFN0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms