Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 AC026366.1-201ENST00000488803 879 ntBASIC19.18■□□□□ 0.66
CTSFQ9UBX1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 AC006058.3-201ENST00000606217 1069 ntBASIC19.18■□□□□ 0.66
CTSFQ9UBX1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTSFQ9UBX1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 AC008687.6-201ENST00000596318 630 ntBASIC19.17■□□□□ 0.66
CTSFQ9UBX1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSFQ9UBX1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.16■□□□□ 0.66
CTSFQ9UBX1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.16■□□□□ 0.66
CTSFQ9UBX1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 AC008403.3-201ENST00000598924 454 ntBASIC19.15■□□□□ 0.66
CTSFQ9UBX1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSFQ9UBX1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CTSFQ9UBX1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTSFQ9UBX1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSFQ9UBX1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CTSFQ9UBX1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTSFQ9UBX1 PLK5-205ENST00000642079 1969 ntBASIC19.14■□□□□ 0.65
CTSFQ9UBX1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSFQ9UBX1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.14■□□□□ 0.65
CTSFQ9UBX1 AC128676.1-201ENST00000454392 318 ntBASIC19.14■□□□□ 0.65
CTSFQ9UBX1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms