Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 AC121338.2-201ENST00000622535 1744 ntBASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCF1Q9UBD9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 AC128676.1-201ENST00000454392 318 ntBASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 UNC93B4-201ENST00000505679 747 ntBASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 MIR2861-201ENST00000636310 90 ntBASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 LINC00565-201ENST00000562710 2331 ntBASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCF1Q9UBD9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 AC079834.2-201ENST00000609776 1949 ntBASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 AC073648.6-201ENST00000641589 218 ntBASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCF1Q9UBD9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 AC098590.1-201ENST00000468126 897 ntBASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 SOX15-203ENST00000570788 1093 ntBASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCF1Q9UBD9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 KRT8P36-201ENST00000489121 1440 ntBASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 AC066615.1-201ENST00000640911 628 ntBASIC18.1■□□□□ 0.49
CLCF1Q9UBD9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms