Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 AP000525.1-201ENST00000608286 694 ntBASIC20.26■□□□□ 0.83
NCDNQ9UBB6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 AC003102.1-202ENST00000563394 1796 ntBASIC20.26■□□□□ 0.83
NCDNQ9UBB6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.26■□□□□ 0.83
NCDNQ9UBB6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NCDNQ9UBB6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NCDNQ9UBB6 AC137767.1-201ENST00000602918 1920 ntBASIC20.23■□□□□ 0.83
NCDNQ9UBB6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 AC073195.1-201ENST00000607241 877 ntBASIC20.23■□□□□ 0.83
NCDNQ9UBB6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 AC079598.2-202ENST00000546624 1451 ntBASIC20.23■□□□□ 0.83
NCDNQ9UBB6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
NCDNQ9UBB6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 AL117328.2-201ENST00000624617 1940 ntBASIC20.22■□□□□ 0.83
NCDNQ9UBB6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 UPK3BP1-201ENST00000428678 509 ntBASIC20.22■□□□□ 0.83
NCDNQ9UBB6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 KRT16P5-201ENST00000455284 522 ntBASIC20.22■□□□□ 0.83
NCDNQ9UBB6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCDNQ9UBB6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms