Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 AC053503.5-201ENST00000601508 636 ntBASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 AL139246.5-201ENST00000606645 996 ntBASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 AL354811.1-201ENST00000610286 706 ntBASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 MIR6084-201ENST00000622012 110 ntBASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.43■□□□□ 0.86
CPSF2Q9P2I0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 AC112907.3-201ENST00000577781 2400 ntBASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 AC142381.2-201ENST00000566120 298 ntBASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 TPRG1LP1-201ENST00000598702 760 ntBASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.42■□□□□ 0.86
CPSF2Q9P2I0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 AP004607.4-201ENST00000530158 1459 ntBASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.41■□□□□ 0.86
CPSF2Q9P2I0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.4■□□□□ 0.86
CPSF2Q9P2I0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CPSF2Q9P2I0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
CPSF2Q9P2I0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CPSF2Q9P2I0 AC011484.1-201ENST00000377652 1995 ntBASIC20.39■□□□□ 0.86
CPSF2Q9P2I0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.39■□□□□ 0.86
CPSF2Q9P2I0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.39■□□□□ 0.86
CPSF2Q9P2I0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPSF2Q9P2I0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.39■□□□□ 0.86
CPSF2Q9P2I0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms