Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
COMMD9Q9P000 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.3■□□□□ 0.36
COMMD9Q9P000 AL512631.2-201ENST00000604634 923 ntBASIC17.3■□□□□ 0.36
COMMD9Q9P000 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.3■□□□□ 0.36
COMMD9Q9P000 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 HTR7P1-202ENST00000624664 4411 ntBASIC17.3■□□□□ 0.36
COMMD9Q9P000 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
COMMD9Q9P000 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.3■□□□□ 0.36
COMMD9Q9P000 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COMMD9Q9P000 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 OR6D1P-202ENST00000641007 5290 ntBASIC17.3■□□□□ 0.36
COMMD9Q9P000 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD9Q9P000 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
COMMD9Q9P000 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.29■□□□□ 0.36
COMMD9Q9P000 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
COMMD9Q9P000 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
COMMD9Q9P000 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.29■□□□□ 0.36
COMMD9Q9P000 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.29■□□□□ 0.36
COMMD9Q9P000 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.29■□□□□ 0.36
COMMD9Q9P000 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 DUX4L19-201ENST00000557448 1267 ntBASIC17.29■□□□□ 0.36
COMMD9Q9P000 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.29■□□□□ 0.36
COMMD9Q9P000 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
COMMD9Q9P000 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD9Q9P000 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COMMD9Q9P000 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD9Q9P000 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD9Q9P000 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD9Q9P000 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.28■□□□□ 0.36
COMMD9Q9P000 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD9Q9P000 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
COMMD9Q9P000 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
COMMD9Q9P000 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
COMMD9Q9P000 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.28■□□□□ 0.36
COMMD9Q9P000 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD9Q9P000 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD9Q9P000 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
COMMD9Q9P000 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD9Q9P000 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD9Q9P000 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
COMMD9Q9P000 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
COMMD9Q9P000 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD9Q9P000 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD9Q9P000 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.27■□□□□ 0.36
COMMD9Q9P000 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD9Q9P000 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
COMMD9Q9P000 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD9Q9P000 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD9Q9P000 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.27■□□□□ 0.36
COMMD9Q9P000 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.27■□□□□ 0.36
COMMD9Q9P000 AC010525.1-201ENST00000585559 441 ntBASIC17.27■□□□□ 0.36
COMMD9Q9P000 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD9Q9P000 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.27■□□□□ 0.36
COMMD9Q9P000 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD9Q9P000 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
COMMD9Q9P000 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD9Q9P000 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
COMMD9Q9P000 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.27■□□□□ 0.35
COMMD9Q9P000 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD9Q9P000 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
COMMD9Q9P000 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD9Q9P000 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
COMMD9Q9P000 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
COMMD9Q9P000 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD9Q9P000 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD9Q9P000 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD9Q9P000 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD9Q9P000 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD9Q9P000 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD9Q9P000 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD9Q9P000 AC116562.4-201ENST00000641316 2276 ntBASIC17.26■□□□□ 0.35
COMMD9Q9P000 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD9Q9P000 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.26■□□□□ 0.35
COMMD9Q9P000 AP005435.1-201ENST00000529293 1178 ntBASIC17.26■□□□□ 0.35
COMMD9Q9P000 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD9Q9P000 SYT6-210ENST00000641643 1587 ntBASIC17.26■□□□□ 0.35
COMMD9Q9P000 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms