Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBP1Q9NZI7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 PCDHAC2-203ENST00000615316 3011 ntBASIC20.73■□□□□ 0.91
UBP1Q9NZI7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 AC080038.1-201ENST00000611274 1154 ntBASIC20.73■□□□□ 0.91
UBP1Q9NZI7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBP1Q9NZI7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 AC007322.1-201ENST00000426983 750 ntBASIC20.72■□□□□ 0.91
UBP1Q9NZI7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBP1Q9NZI7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 FAM21FP-204ENST00000608637 956 ntBASIC20.71■□□□□ 0.91
UBP1Q9NZI7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBP1Q9NZI7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
UBP1Q9NZI7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
UBP1Q9NZI7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
UBP1Q9NZI7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
UBP1Q9NZI7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 CYP2T1P-201ENST00000432607 1285 ntBASIC20.7■□□□□ 0.9
UBP1Q9NZI7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 AC231657.2-201ENST00000624556 255 ntBASIC20.7■□□□□ 0.9
UBP1Q9NZI7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 AC073111.5-205ENST00000641717 521 ntBASIC20.7■□□□□ 0.9
UBP1Q9NZI7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 AL512408.1-201ENST00000569378 2000 ntBASIC20.7■□□□□ 0.9
UBP1Q9NZI7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBP1Q9NZI7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBP1Q9NZI7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms