Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 KRT18P20-201ENST00000548986 1279 ntBASIC18.94■□□□□ 0.62
RLIMQ9NVW2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RLIMQ9NVW2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.93■□□□□ 0.62
RLIMQ9NVW2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 KRT19P1-201ENST00000405746 1186 ntBASIC18.92■□□□□ 0.62
RLIMQ9NVW2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RLIMQ9NVW2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 AC116050.2-201ENST00000612102 1779 ntBASIC18.91■□□□□ 0.62
RLIMQ9NVW2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 AC097381.1-201ENST00000429019 1296 ntBASIC18.91■□□□□ 0.62
RLIMQ9NVW2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.91■□□□□ 0.62
RLIMQ9NVW2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 NTF6G-201ENST00000591094 616 ntBASIC18.9■□□□□ 0.62
RLIMQ9NVW2 AC087623.3-201ENST00000607047 1098 ntBASIC18.9■□□□□ 0.62
RLIMQ9NVW2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
RLIMQ9NVW2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms