Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NECTIN3Q9NQS3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 CYP2T1P-201ENST00000432607 1285 ntBASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 AL591742.1-201ENST00000604433 565 ntBASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NECTIN3Q9NQS3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NECTIN3Q9NQS3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 AC016405.3-201ENST00000607710 860 ntBASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 FEM1AP1-201ENST00000431297 1995 ntBASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NECTIN3Q9NQS3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 NCF1B-203ENST00000435988 1254 ntBASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.43■□□□□ 0.7
NECTIN3Q9NQS3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms