Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP13A3Q9H7F0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 AC097658.1-201ENST00000475555 843 ntBASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 AC091874.3-201ENST00000512672 1195 ntBASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP13A3Q9H7F0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP13A3Q9H7F0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP13A3Q9H7F0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
ATP13A3Q9H7F0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP13A3Q9H7F0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ATP13A3Q9H7F0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP13A3Q9H7F0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ATP13A3Q9H7F0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 KRT8P36-201ENST00000489121 1440 ntBASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP13A3Q9H7F0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 MYC-209ENST00000641252 345 ntBASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP13A3Q9H7F0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 AL121603.2-201ENST00000557373 2117 ntBASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 FP700111.2-201ENST00000619190 1892 ntBASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP13A3Q9H7F0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms