Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 AC233702.5-201ENST00000584107 538 ntBASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
RPAP3Q9H6T3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 Z98882.1-201ENST00000622160 2253 ntBASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 RPS2P55-201ENST00000397318 883 ntBASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 AC012618.2-201ENST00000428058 849 ntBASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 AC107956.1-201ENST00000494359 873 ntBASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 AL117328.2-201ENST00000624617 1940 ntBASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP3Q9H6T3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.53■■□□□ 1.36
RPAP3Q9H6T3 AC027702.1-201ENST00000563810 1770 ntBASIC23.53■■□□□ 1.36
RPAP3Q9H6T3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RPAP3Q9H6T3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.53■■□□□ 1.36
RPAP3Q9H6T3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.53■■□□□ 1.36
RPAP3Q9H6T3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.53■■□□□ 1.36
RPAP3Q9H6T3 AC110285.5-201ENST00000611501 352 ntBASIC23.53■■□□□ 1.36
RPAP3Q9H6T3 FBXW4P1-201ENST00000426721 2239 ntBASIC23.53■■□□□ 1.36
RPAP3Q9H6T3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.53■■□□□ 1.36
RPAP3Q9H6T3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RPAP3Q9H6T3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RPAP3Q9H6T3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP3Q9H6T3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 TSPY7P-201ENST00000431358 1114 ntBASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.51■■□□□ 1.35
RPAP3Q9H6T3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPAP3Q9H6T3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
RPAP3Q9H6T3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RPAP3Q9H6T3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RPAP3Q9H6T3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RPAP3Q9H6T3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RPAP3Q9H6T3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPAP3Q9H6T3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.5■■□□□ 1.35
RPAP3Q9H6T3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
RPAP3Q9H6T3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms