Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 MIR2861-201ENST00000636310 90 ntBASIC21.18■□□□□ 0.98
DDX47Q9H0S4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX47Q9H0S4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 RASA4CP-201ENST00000424092 1398 ntBASIC21.17■□□□□ 0.98
DDX47Q9H0S4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX47Q9H0S4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 AL020996.1-203ENST00000536896 2307 ntBASIC21.16■□□□□ 0.98
DDX47Q9H0S4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 AF213884.3-201ENST00000563833 479 ntBASIC21.16■□□□□ 0.98
DDX47Q9H0S4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 AC106739.1-201ENST00000617035 715 ntBASIC21.16■□□□□ 0.98
DDX47Q9H0S4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX47Q9H0S4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 EDA-201ENST00000338901 1233 ntBASIC21.15■□□□□ 0.98
DDX47Q9H0S4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 MIR939-201ENST00000401314 82 ntBASIC21.15■□□□□ 0.98
DDX47Q9H0S4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX47Q9H0S4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
DDX47Q9H0S4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
DDX47Q9H0S4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DDX47Q9H0S4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DDX47Q9H0S4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.14■□□□□ 0.98
DDX47Q9H0S4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DDX47Q9H0S4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
DDX47Q9H0S4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.14■□□□□ 0.97
DDX47Q9H0S4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 AC245052.3-201ENST00000450182 901 ntBASIC21.14■□□□□ 0.97
DDX47Q9H0S4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms