Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 AC233263.1-201ENST00000578059 224 ntBASIC21.17■□□□□ 0.98
RNF38Q9H0F5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 MIR2861-201ENST00000636310 90 ntBASIC21.16■□□□□ 0.98
RNF38Q9H0F5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF38Q9H0F5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF38Q9H0F5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF38Q9H0F5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.15■□□□□ 0.98
RNF38Q9H0F5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF38Q9H0F5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF38Q9H0F5 AC093827.2-201ENST00000512654 315 ntBASIC21.15■□□□□ 0.98
RNF38Q9H0F5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RNF38Q9H0F5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF38Q9H0F5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF38Q9H0F5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF38Q9H0F5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF38Q9H0F5 AC026310.3-201ENST00000625186 2373 ntBASIC21.15■□□□□ 0.98
RNF38Q9H0F5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF38Q9H0F5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF38Q9H0F5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RNF38Q9H0F5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF38Q9H0F5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF38Q9H0F5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 KRT17P3-201ENST00000420566 1262 ntBASIC21.14■□□□□ 0.97
RNF38Q9H0F5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 PLK5-205ENST00000642079 1969 ntBASIC21.14■□□□□ 0.97
RNF38Q9H0F5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF38Q9H0F5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF38Q9H0F5 KRT8P36-201ENST00000489121 1440 ntBASIC21.12■□□□□ 0.97
RNF38Q9H0F5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF38Q9H0F5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF38Q9H0F5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF38Q9H0F5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF38Q9H0F5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms