Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 AP000793.1-201ENST00000527364 740 ntTSL 3 BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 AL391156.1-201ENST00000554965 554 ntBASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 SATB1-AS1-212ENST00000596152 610 ntTSL 5 BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 AC055876.5-201ENST00000605667 259 ntBASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 AC009950.2-201ENST00000636548 183 ntBASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 AC119674.1-213ENST00000641177 1386 ntBASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC12.54□□□□□ -0.4
KRTAP3-3Q9BYR6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 OR13C3-201ENST00000374781 1108 ntBASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 LINC00189-201ENST00000420364 989 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 LINC01715-202ENST00000427804 688 ntTSL 5 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 IFNNP1-201ENST00000429219 553 ntBASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 UGT1A2P-201ENST00000454886 866 ntBASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 ST13P12-201ENST00000508958 1094 ntBASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 AP001021.2-201ENST00000577935 544 ntTSL 5 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 AC008833.1-201ENST00000611633 691 ntBASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 AL023803.2-201ENST00000620080 638 ntBASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC12.53□□□□□ -0.4
KRTAP3-3Q9BYR6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KRTAP3-3Q9BYR6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC12.52□□□□□ -0.4
KRTAP3-3Q9BYR6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
KRTAP3-3Q9BYR6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
KRTAP3-3Q9BYR6 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 RPS6P15-201ENST00000431996 751 ntBASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 AC012558.1-201ENST00000451946 622 ntTSL 3 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 AC116366.2-201ENST00000454380 767 ntTSL 3 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 MTATP6P14-201ENST00000455189 673 ntBASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 RN7SL519P-201ENST00000497925 288 ntBASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 YWHAE-210ENST00000573026 780 ntTSL 3 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 AC012417.1-201ENST00000582307 1039 ntBASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 SETD8P1-201ENST00000623146 1180 ntBASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 AC021755.1-201ENST00000559747 1447 ntBASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
KRTAP3-3Q9BYR6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 KRT18P50-201ENST00000404337 1243 ntBASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 AC106883.1-201ENST00000418805 562 ntBASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 AC019185.2-201ENST00000424628 520 ntTSL 4 BASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 RPL17P35-201ENST00000432217 549 ntBASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 LDHBP2-201ENST00000456969 1005 ntBASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 AC020898.1-201ENST00000474167 787 ntBASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 RPF2P2-201ENST00000504693 896 ntBASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 AC091860.1-201ENST00000505723 432 ntBASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 AC073651.1-201ENST00000544015 465 ntTSL 3 BASIC12.51□□□□□ -0.41
KRTAP3-3Q9BYR6 AC092368.2-201ENST00000565911 600 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms