Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 AL596275.1-201ENST00000423464 877 ntBASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 AL049796.1-201ENST00000565336 1766 ntBASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC6.94□□□□□ -1.3
KRTAP4-3Q9BYR4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 SAPCD2P1-201ENST00000395413 1184 ntBASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 C1QBPP2-201ENST00000528754 825 ntBASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 AC060766.5-201ENST00000590539 871 ntBASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 AL359736.2-201ENST00000621992 437 ntBASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
KRTAP4-3Q9BYR4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms