Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.34■□□□□ 0.85
CPNE1Q99829 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CPNE1Q99829 SMG8-203ENST00000578922 2178 ntBASIC20.34■□□□□ 0.85
CPNE1Q99829 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CPNE1Q99829 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE1Q99829 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE1Q99829 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE1Q99829 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.34■□□□□ 0.85
CPNE1Q99829 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.34■□□□□ 0.85
CPNE1Q99829 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.34■□□□□ 0.85
CPNE1Q99829 KRT18P14-201ENST00000534205 1250 ntBASIC20.34■□□□□ 0.85
CPNE1Q99829 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.34■□□□□ 0.85
CPNE1Q99829 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.34■□□□□ 0.85
CPNE1Q99829 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.34■□□□□ 0.85
CPNE1Q99829 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE1Q99829 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE1Q99829 AC004854.2-201ENST00000608450 1441 ntBASIC20.34■□□□□ 0.85
CPNE1Q99829 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE1Q99829 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE1Q99829 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.34■□□□□ 0.85
CPNE1Q99829 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.34■□□□□ 0.85
CPNE1Q99829 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE1Q99829 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CPNE1Q99829 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.33■□□□□ 0.85
CPNE1Q99829 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE1Q99829 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.33■□□□□ 0.85
CPNE1Q99829 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE1Q99829 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CPNE1Q99829 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE1Q99829 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.33■□□□□ 0.85
CPNE1Q99829 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.33■□□□□ 0.85
CPNE1Q99829 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CPNE1Q99829 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE1Q99829 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE1Q99829 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE1Q99829 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.33■□□□□ 0.85
CPNE1Q99829 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE1Q99829 KRT8P36-201ENST00000489121 1440 ntBASIC20.33■□□□□ 0.84
CPNE1Q99829 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE1Q99829 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.33■□□□□ 0.84
CPNE1Q99829 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE1Q99829 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CPNE1Q99829 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE1Q99829 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE1Q99829 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CPNE1Q99829 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE1Q99829 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE1Q99829 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.32■□□□□ 0.84
CPNE1Q99829 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE1Q99829 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.32■□□□□ 0.84
CPNE1Q99829 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.32■□□□□ 0.84
CPNE1Q99829 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.32■□□□□ 0.84
CPNE1Q99829 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE1Q99829 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.32■□□□□ 0.84
CPNE1Q99829 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CPNE1Q99829 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE1Q99829 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE1Q99829 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE1Q99829 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CPNE1Q99829 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE1Q99829 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE1Q99829 AC019069.1-201ENST00000610008 1333 ntBASIC20.31■□□□□ 0.84
CPNE1Q99829 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE1Q99829 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.31■□□□□ 0.84
CPNE1Q99829 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE1Q99829 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE1Q99829 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.31■□□□□ 0.84
CPNE1Q99829 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE1Q99829 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE1Q99829 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CPNE1Q99829 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE1Q99829 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.31■□□□□ 0.84
CPNE1Q99829 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE1Q99829 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CPNE1Q99829 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE1Q99829 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE1Q99829 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE1Q99829 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.3■□□□□ 0.84
CPNE1Q99829 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE1Q99829 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE1Q99829 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE1Q99829 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE1Q99829 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE1Q99829 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CPNE1Q99829 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE1Q99829 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE1Q99829 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE1Q99829 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE1Q99829 FAM21FP-204ENST00000608637 956 ntBASIC20.3■□□□□ 0.84
CPNE1Q99829 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.3■□□□□ 0.84
CPNE1Q99829 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE1Q99829 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE1Q99829 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE1Q99829 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE1Q99829 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE1Q99829 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE1Q99829 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CPNE1Q99829 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE1Q99829 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE1Q99829 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms