Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF11Q99590 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF11Q99590 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF11Q99590 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF11Q99590 RER1-204ENST00000378518 522 ntTSL 3 BASIC29.47■■■□□ 2.31
SCAF11Q99590 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF11Q99590 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF11Q99590 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF11Q99590 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC29.47■■■□□ 2.31
SCAF11Q99590 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SCAF11Q99590 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF11Q99590 MOK-233ENST00000524214 1539 ntTSL 2 BASIC29.46■■■□□ 2.31
SCAF11Q99590 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF11Q99590 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF11Q99590 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF11Q99590 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
SCAF11Q99590 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF11Q99590 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC29.46■■■□□ 2.31
SCAF11Q99590 TPM1-226ENST00000560959 925 ntTSL 2 BASIC29.46■■■□□ 2.31
SCAF11Q99590 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC29.46■■■□□ 2.31
SCAF11Q99590 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC29.46■■■□□ 2.31
SCAF11Q99590 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SCAF11Q99590 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
SCAF11Q99590 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC29.45■■■□□ 2.31
SCAF11Q99590 AC012676.1-201ENST00000574705 1949 ntBASIC29.45■■■□□ 2.31
SCAF11Q99590 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
SCAF11Q99590 SAPCD2P4-201ENST00000424595 1171 ntBASIC29.45■■■□□ 2.31
SCAF11Q99590 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC29.45■■■□□ 2.31
SCAF11Q99590 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC29.45■■■□□ 2.31
SCAF11Q99590 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC29.45■■■□□ 2.31
SCAF11Q99590 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SCAF11Q99590 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SCAF11Q99590 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SCAF11Q99590 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC29.45■■■□□ 2.3
SCAF11Q99590 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
SCAF11Q99590 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
SCAF11Q99590 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
SCAF11Q99590 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
SCAF11Q99590 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC29.44■■■□□ 2.3
SCAF11Q99590 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC29.44■■■□□ 2.3
SCAF11Q99590 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC29.44■■■□□ 2.3
SCAF11Q99590 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC29.44■■■□□ 2.3
SCAF11Q99590 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC29.44■■■□□ 2.3
SCAF11Q99590 ME2-206ENST00000638410 2289 ntTSL 5 BASIC29.44■■■□□ 2.3
SCAF11Q99590 ME2-210ENST00000639255 2262 ntTSL 5 BASIC29.44■■■□□ 2.3
SCAF11Q99590 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SCAF11Q99590 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC29.43■■■□□ 2.3
SCAF11Q99590 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC29.43■■■□□ 2.3
SCAF11Q99590 AF186192.3-201ENST00000583427 947 ntBASIC29.43■■■□□ 2.3
SCAF11Q99590 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SCAF11Q99590 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
SCAF11Q99590 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SCAF11Q99590 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF11Q99590 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF11Q99590 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC29.42■■■□□ 2.3
SCAF11Q99590 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC29.42■■■□□ 2.3
SCAF11Q99590 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC29.42■■■□□ 2.3
SCAF11Q99590 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC29.42■■■□□ 2.3
SCAF11Q99590 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC29.42■■■□□ 2.3
SCAF11Q99590 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
SCAF11Q99590 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
SCAF11Q99590 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF11Q99590 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF11Q99590 AC116050.2-201ENST00000612102 1779 ntBASIC29.42■■■□□ 2.3
SCAF11Q99590 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SCAF11Q99590 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
SCAF11Q99590 MFF-203ENST00000349901 1716 ntTSL 2 BASIC29.42■■■□□ 2.3
SCAF11Q99590 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF11Q99590 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF11Q99590 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF11Q99590 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF11Q99590 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF11Q99590 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
SCAF11Q99590 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC29.41■■■□□ 2.3
SCAF11Q99590 RMI2-205ENST00000576027 818 ntTSL 2 BASIC29.41■■■□□ 2.3
SCAF11Q99590 RPS15-203ENST00000586096 570 ntTSL 2 BASIC29.41■■■□□ 2.3
SCAF11Q99590 KRT8P9-201ENST00000558927 1449 ntBASIC29.41■■■□□ 2.3
SCAF11Q99590 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF11Q99590 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SCAF11Q99590 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF11Q99590 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC29.4■■■□□ 2.3
SCAF11Q99590 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF11Q99590 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF11Q99590 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCAF11Q99590 AC113347.1-201ENST00000413321 391 ntBASIC29.4■■■□□ 2.3
SCAF11Q99590 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC29.4■■■□□ 2.3
SCAF11Q99590 NME3-204ENST00000563498 920 ntTSL 2 BASIC29.4■■■□□ 2.3
SCAF11Q99590 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC29.4■■■□□ 2.3
SCAF11Q99590 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC29.39■■■□□ 2.3
SCAF11Q99590 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF11Q99590 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF11Q99590 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF11Q99590 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF11Q99590 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF11Q99590 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF11Q99590 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF11Q99590 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC29.39■■■□□ 2.3
SCAF11Q99590 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF11Q99590 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF11Q99590 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms