Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 AC007322.4-201ENST00000509611 723 ntBASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 FAM21FP-204ENST00000608637 956 ntBASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB18PQ96TA0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 AC013268.1-206ENST00000638368 961 ntBASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 AC112229.1-201ENST00000639295 961 ntBASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB18PQ96TA0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 AC016769.1-201ENST00000409132 1010 ntBASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 MIR5787-201ENST00000611784 55 ntBASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB18PQ96TA0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 AC068338.2-201ENST00000563278 1430 ntBASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 AFG3L1P-217ENST00000557444 2447 ntBASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB18PQ96TA0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 CYP21A1P-202ENST00000354927 1481 ntBASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB18PQ96TA0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB18PQ96TA0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB18PQ96TA0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms