Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HHIPQ96QV1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HHIPQ96QV1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HHIPQ96QV1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.68■□□□□ 0.9
HHIPQ96QV1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.68■□□□□ 0.9
HHIPQ96QV1 AC239809.2-201ENST00000415381 517 ntBASIC20.68■□□□□ 0.9
HHIPQ96QV1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 BX088651.1-201ENST00000540551 451 ntBASIC20.68■□□□□ 0.9
HHIPQ96QV1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HHIPQ96QV1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HHIPQ96QV1 AC124016.1-201ENST00000609552 612 ntBASIC20.68■□□□□ 0.9
HHIPQ96QV1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
HHIPQ96QV1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HHIPQ96QV1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.68■□□□□ 0.9
HHIPQ96QV1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HHIPQ96QV1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHIPQ96QV1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 AC006557.6-201ENST00000623071 864 ntBASIC20.67■□□□□ 0.9
HHIPQ96QV1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.67■□□□□ 0.9
HHIPQ96QV1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HHIPQ96QV1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.66■□□□□ 0.9
HHIPQ96QV1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
HHIPQ96QV1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HHIPQ96QV1 KRT18P21-201ENST00000515767 1272 ntBASIC20.66■□□□□ 0.9
HHIPQ96QV1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.66■□□□□ 0.9
HHIPQ96QV1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.66■□□□□ 0.9
HHIPQ96QV1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.66■□□□□ 0.9
HHIPQ96QV1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HHIPQ96QV1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HHIPQ96QV1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HHIPQ96QV1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HHIPQ96QV1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HHIPQ96QV1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HHIPQ96QV1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HHIPQ96QV1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HHIPQ96QV1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HHIPQ96QV1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.65■□□□□ 0.9
HHIPQ96QV1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HHIPQ96QV1 AC087633.2-202ENST00000565166 1439 ntBASIC20.65■□□□□ 0.9
HHIPQ96QV1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.65■□□□□ 0.9
HHIPQ96QV1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HHIPQ96QV1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HHIPQ96QV1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HHIPQ96QV1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.65■□□□□ 0.9
HHIPQ96QV1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.65■□□□□ 0.9
HHIPQ96QV1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HHIPQ96QV1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HHIPQ96QV1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.65■□□□□ 0.9
HHIPQ96QV1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HHIPQ96QV1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HHIPQ96QV1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HHIPQ96QV1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.65■□□□□ 0.9
HHIPQ96QV1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
HHIPQ96QV1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HHIPQ96QV1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.64■□□□□ 0.89
HHIPQ96QV1 AC026310.3-201ENST00000625186 2373 ntBASIC20.64■□□□□ 0.89
HHIPQ96QV1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HHIPQ96QV1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.64■□□□□ 0.89
HHIPQ96QV1 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.64■□□□□ 0.89
HHIPQ96QV1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.64■□□□□ 0.89
HHIPQ96QV1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HHIPQ96QV1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.64■□□□□ 0.89
HHIPQ96QV1 AC010331.1-201ENST00000611423 582 ntBASIC20.64■□□□□ 0.89
HHIPQ96QV1 AL049637.2-201ENST00000641778 930 ntBASIC20.64■□□□□ 0.89
HHIPQ96QV1 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms