Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.19■□□□□ 0.66
COL21A1Q96P44 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL21A1Q96P44 AC011484.1-201ENST00000377652 1995 ntBASIC19.19■□□□□ 0.66
COL21A1Q96P44 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COL21A1Q96P44 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL21A1Q96P44 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL21A1Q96P44 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL21A1Q96P44 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL21A1Q96P44 AC004911.1-201ENST00000416316 871 ntBASIC19.19■□□□□ 0.66
COL21A1Q96P44 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.19■□□□□ 0.66
COL21A1Q96P44 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.19■□□□□ 0.66
COL21A1Q96P44 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.19■□□□□ 0.66
COL21A1Q96P44 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.19■□□□□ 0.66
COL21A1Q96P44 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.19■□□□□ 0.66
COL21A1Q96P44 AC010536.3-201ENST00000620306 533 ntBASIC19.19■□□□□ 0.66
COL21A1Q96P44 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL21A1Q96P44 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.19■□□□□ 0.66
COL21A1Q96P44 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.19■□□□□ 0.66
COL21A1Q96P44 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL21A1Q96P44 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL21A1Q96P44 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL21A1Q96P44 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
COL21A1Q96P44 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL21A1Q96P44 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL21A1Q96P44 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL21A1Q96P44 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL21A1Q96P44 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL21A1Q96P44 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL21A1Q96P44 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL21A1Q96P44 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL21A1Q96P44 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COL21A1Q96P44 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL21A1Q96P44 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL21A1Q96P44 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL21A1Q96P44 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
COL21A1Q96P44 RBM17P2-201ENST00000616397 1405 ntBASIC19.17■□□□□ 0.66
COL21A1Q96P44 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL21A1Q96P44 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
COL21A1Q96P44 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.16■□□□□ 0.66
COL21A1Q96P44 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COL21A1Q96P44 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
COL21A1Q96P44 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
COL21A1Q96P44 AC243732.1-201ENST00000612648 864 ntBASIC19.16■□□□□ 0.66
COL21A1Q96P44 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL21A1Q96P44 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.16■□□□□ 0.66
COL21A1Q96P44 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms