Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.37■□□□□ 0.21
RITA1Q96K30 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.37■□□□□ 0.21
RITA1Q96K30 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RITA1Q96K30 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.36■□□□□ 0.21
RITA1Q96K30 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RITA1Q96K30 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.36■□□□□ 0.21
RITA1Q96K30 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RITA1Q96K30 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 CYP2T1P-201ENST00000432607 1285 ntBASIC16.36■□□□□ 0.21
RITA1Q96K30 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.36■□□□□ 0.21
RITA1Q96K30 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RITA1Q96K30 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.36■□□□□ 0.21
RITA1Q96K30 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.36■□□□□ 0.21
RITA1Q96K30 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RITA1Q96K30 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RITA1Q96K30 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RITA1Q96K30 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RITA1Q96K30 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.36■□□□□ 0.21
RITA1Q96K30 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RITA1Q96K30 KRT8P36-201ENST00000489121 1440 ntBASIC16.36■□□□□ 0.21
RITA1Q96K30 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.36■□□□□ 0.21
RITA1Q96K30 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RITA1Q96K30 PCDHAC2-203ENST00000615316 3011 ntBASIC16.35■□□□□ 0.21
RITA1Q96K30 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.35■□□□□ 0.21
RITA1Q96K30 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RITA1Q96K30 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.35■□□□□ 0.21
RITA1Q96K30 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.35■□□□□ 0.21
RITA1Q96K30 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 RAP2CP1-201ENST00000605103 478 ntBASIC16.35■□□□□ 0.21
RITA1Q96K30 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.35■□□□□ 0.21
RITA1Q96K30 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.35■□□□□ 0.21
RITA1Q96K30 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 CYP21A1P-202ENST00000354927 1481 ntBASIC16.35■□□□□ 0.21
RITA1Q96K30 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.35■□□□□ 0.21
RITA1Q96K30 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RITA1Q96K30 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 AC092720.2-201ENST00000602388 1665 ntBASIC16.34■□□□□ 0.21
RITA1Q96K30 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RITA1Q96K30 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.34■□□□□ 0.21
RITA1Q96K30 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.34■□□□□ 0.21
RITA1Q96K30 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.34■□□□□ 0.21
RITA1Q96K30 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 AC005181.1-201ENST00000604782 1256 ntBASIC16.34■□□□□ 0.21
RITA1Q96K30 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.34■□□□□ 0.21
RITA1Q96K30 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RITA1Q96K30 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.34■□□□□ 0.21
RITA1Q96K30 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.34■□□□□ 0.21
RITA1Q96K30 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RITA1Q96K30 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.33■□□□□ 0.21
RITA1Q96K30 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RITA1Q96K30 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RITA1Q96K30 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.33■□□□□ 0.21
RITA1Q96K30 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.33■□□□□ 0.21
RITA1Q96K30 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
RITA1Q96K30 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.33■□□□□ 0.2
RITA1Q96K30 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 AC112907.3-201ENST00000577781 2400 ntBASIC16.33■□□□□ 0.2
RITA1Q96K30 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.33■□□□□ 0.2
RITA1Q96K30 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms