Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 RARRES2P4-201ENST00000514074 484 ntBASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 AL356652.1-201ENST00000615962 565 ntBASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM5Q96HC4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 BID-214ENST00000617586 542 ntTSL 5 BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 AC099778.1-201ENST00000568593 1911 ntBASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM5Q96HC4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 AC231657.2-201ENST00000624556 255 ntBASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDLIM5Q96HC4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 AC022517.1-201ENST00000592429 346 ntBASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM5Q96HC4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
PDLIM5Q96HC4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 MCRIP2P1-201ENST00000394346 511 ntBASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM5Q96HC4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms