Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 MYCNOS-205ENST00000641950 531 ntBASIC20.67■□□□□ 0.9
CCDC97Q96F63 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC97Q96F63 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC97Q96F63 AL049796.1-201ENST00000565336 1766 ntBASIC20.67■□□□□ 0.9
CCDC97Q96F63 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC97Q96F63 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC97Q96F63 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC97Q96F63 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC97Q96F63 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CCDC97Q96F63 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC97Q96F63 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC97Q96F63 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC97Q96F63 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC97Q96F63 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC97Q96F63 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 MFSD11-216ENST00000590393 1141 ntBASIC20.65■□□□□ 0.9
CCDC97Q96F63 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC97Q96F63 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC97Q96F63 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC97Q96F63 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC97Q96F63 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC97Q96F63 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC97Q96F63 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC97Q96F63 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC97Q96F63 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC97Q96F63 KRT16P2-201ENST00000414673 1423 ntBASIC20.64■□□□□ 0.89
CCDC97Q96F63 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC97Q96F63 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC97Q96F63 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC97Q96F63 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CCDC97Q96F63 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC97Q96F63 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CCDC97Q96F63 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC97Q96F63 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC97Q96F63 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC97Q96F63 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC97Q96F63 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC97Q96F63 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC97Q96F63 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC97Q96F63 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC97Q96F63 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC97Q96F63 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC97Q96F63 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC97Q96F63 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC97Q96F63 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC97Q96F63 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC97Q96F63 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC97Q96F63 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC97Q96F63 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC97Q96F63 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC97Q96F63 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CCDC97Q96F63 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC97Q96F63 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC97Q96F63 KRT18P20-201ENST00000548986 1279 ntBASIC20.63■□□□□ 0.89
CCDC97Q96F63 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC97Q96F63 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC97Q96F63 AC066615.1-201ENST00000640911 628 ntBASIC20.63■□□□□ 0.89
CCDC97Q96F63 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC97Q96F63 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC97Q96F63 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC97Q96F63 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC97Q96F63 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC97Q96F63 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC97Q96F63 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC97Q96F63 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC97Q96F63 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC97Q96F63 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC97Q96F63 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC97Q96F63 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC97Q96F63 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC97Q96F63 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms