Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.18■□□□□ 0.66
TM9SF4Q92544 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.18■□□□□ 0.66
TM9SF4Q92544 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.18■□□□□ 0.66
TM9SF4Q92544 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.18■□□□□ 0.66
TM9SF4Q92544 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.18■□□□□ 0.66
TM9SF4Q92544 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 AC003102.1-202ENST00000563394 1796 ntBASIC19.18■□□□□ 0.66
TM9SF4Q92544 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TM9SF4Q92544 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.18■□□□□ 0.66
TM9SF4Q92544 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TM9SF4Q92544 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.18■□□□□ 0.66
TM9SF4Q92544 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TM9SF4Q92544 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF4Q92544 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF4Q92544 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.17■□□□□ 0.66
TM9SF4Q92544 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.17■□□□□ 0.66
TM9SF4Q92544 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF4Q92544 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.17■□□□□ 0.66
TM9SF4Q92544 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF4Q92544 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF4Q92544 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TM9SF4Q92544 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF4Q92544 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.17■□□□□ 0.66
TM9SF4Q92544 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.17■□□□□ 0.66
TM9SF4Q92544 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.17■□□□□ 0.66
TM9SF4Q92544 AC006058.3-201ENST00000606217 1069 ntBASIC19.17■□□□□ 0.66
TM9SF4Q92544 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF4Q92544 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF4Q92544 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF4Q92544 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TM9SF4Q92544 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.17■□□□□ 0.66
TM9SF4Q92544 AC026471.6-201ENST00000622954 1905 ntBASIC19.17■□□□□ 0.66
TM9SF4Q92544 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM9SF4Q92544 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.16■□□□□ 0.66
TM9SF4Q92544 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TM9SF4Q92544 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF4Q92544 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TM9SF4Q92544 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF4Q92544 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF4Q92544 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF4Q92544 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF4Q92544 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF4Q92544 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF4Q92544 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.16■□□□□ 0.66
TM9SF4Q92544 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.16■□□□□ 0.66
TM9SF4Q92544 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.16■□□□□ 0.66
TM9SF4Q92544 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.16■□□□□ 0.66
TM9SF4Q92544 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.16■□□□□ 0.66
TM9SF4Q92544 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF4Q92544 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF4Q92544 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM9SF4Q92544 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TM9SF4Q92544 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TM9SF4Q92544 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TM9SF4Q92544 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.16■□□□□ 0.66
TM9SF4Q92544 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TM9SF4Q92544 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.15■□□□□ 0.66
TM9SF4Q92544 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TM9SF4Q92544 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.15■□□□□ 0.66
TM9SF4Q92544 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF4Q92544 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TM9SF4Q92544 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.15■□□□□ 0.66
TM9SF4Q92544 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF4Q92544 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.15■□□□□ 0.66
TM9SF4Q92544 AC026366.1-201ENST00000488803 879 ntBASIC19.15■□□□□ 0.66
TM9SF4Q92544 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.15■□□□□ 0.66
TM9SF4Q92544 AL589743.5-201ENST00000616611 1050 ntBASIC19.15■□□□□ 0.66
TM9SF4Q92544 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF4Q92544 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF4Q92544 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF4Q92544 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF4Q92544 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF4Q92544 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF4Q92544 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM9SF4Q92544 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TM9SF4Q92544 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TM9SF4Q92544 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TM9SF4Q92544 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.14■□□□□ 0.66
TM9SF4Q92544 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TM9SF4Q92544 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TM9SF4Q92544 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF4Q92544 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF4Q92544 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TM9SF4Q92544 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF4Q92544 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.14■□□□□ 0.65
TM9SF4Q92544 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF4Q92544 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF4Q92544 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.14■□□□□ 0.65
TM9SF4Q92544 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.14■□□□□ 0.65
TM9SF4Q92544 UNC93B5-201ENST00000530315 699 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms