Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF4Q8WZA2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF4Q8WZA2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 MIR1224-201ENST00000408193 85 ntBASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 AC011484.1-201ENST00000377652 1995 ntBASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RAPGEF4Q8WZA2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 TSPY15P-201ENST00000457163 923 ntBASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC26.83■■□□□ 1.89
RAPGEF4Q8WZA2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
RAPGEF4Q8WZA2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
RAPGEF4Q8WZA2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
RAPGEF4Q8WZA2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 PENK-204ENST00000518770 863 ntTSL 2 BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RAPGEF4Q8WZA2 ECEL1P1-201ENST00000373592 1742 ntBASIC26.79■■□□□ 1.88
RAPGEF4Q8WZA2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RAPGEF4Q8WZA2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms