Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 AL161729.1-201ENST00000604104 1402 ntBASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 AC026271.3-201ENST00000571884 352 ntBASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 AC010327.4-202ENST00000591484 748 ntBASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 KRT18P58-201ENST00000527480 1120 ntBASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 AP002383.4-201ENST00000442518 975 ntBASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC8.38□□□□□ -1.07
SYNE2Q8WXH0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 PRSS44-201ENST00000515154 1146 ntBASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 AC134684.3-201ENST00000641758 218 ntBASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SYNE2Q8WXH0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 PMS2P7-201ENST00000506558 1336 ntBASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 RPSAP43-201ENST00000402237 625 ntBASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 PAWRP1-201ENST00000451083 565 ntBASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 KRT18P28-201ENST00000453838 1332 ntBASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 CYMP-203ENST00000474680 1263 ntBASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 PGAM5P1-201ENST00000518923 814 ntBASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
SYNE2Q8WXH0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 LINC00543-201ENST00000567234 1845 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms