Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 FAM8A6P-201ENST00000407496 1135 ntBASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 CYP21A1P-202ENST00000354927 1481 ntBASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 AC010542.4-201ENST00000563151 1910 ntBASIC17.13■□□□□ 0.33
CCDC168Q8NDH2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 NAPSB-206ENST00000562112 1266 ntBASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 AC139530.1-201ENST00000575312 1977 ntBASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC168Q8NDH2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC168Q8NDH2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 AC004264.1-201ENST00000608354 794 ntBASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 FAM87A-204ENST00000613235 858 ntBASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC168Q8NDH2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms