Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 PGM5P4-201ENST00000421970 445 ntBASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 KRT18P6-201ENST00000555540 1265 ntBASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 MYC-209ENST00000641252 345 ntBASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDH20Q8N6Y1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 AC105020.6-201ENST00000621523 1217 ntBASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCDH20Q8N6Y1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.77■□□□□ 0.91
PCDH20Q8N6Y1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH20Q8N6Y1 AC121338.2-201ENST00000622535 1744 ntBASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 CD99P1-205ENST00000527459 561 ntBASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 AC083880.1-201ENST00000608266 535 ntBASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH20Q8N6Y1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDH20Q8N6Y1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms