Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 AC022517.1-201ENST00000592429 346 ntBASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 BID-214ENST00000617586 542 ntTSL 5 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TTC9CQ8N5M4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 MIR935-201ENST00000401179 91 ntBASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.07■□□□□ 0.16
TTC9CQ8N5M4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 AC092720.2-201ENST00000602388 1665 ntBASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 PGM5P4-201ENST00000421970 445 ntBASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 AC231657.2-201ENST00000624556 255 ntBASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TTC9CQ8N5M4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 KRT8P36-201ENST00000489121 1440 ntBASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 CNN2P6-201ENST00000439038 900 ntBASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TTC9CQ8N5M4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms