Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.27■□□□□ 0.67
ARHGEF39Q8N4T4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ARHGEF39Q8N4T4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 HLA-B-256ENST00000639848 1089 ntBASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF39Q8N4T4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 FP700111.2-201ENST00000619190 1892 ntBASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
ARHGEF39Q8N4T4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 MIR4651-201ENST00000582622 73 ntBASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.24■□□□□ 0.67
ARHGEF39Q8N4T4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 AC060766.5-201ENST00000590539 871 ntBASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.23■□□□□ 0.67
ARHGEF39Q8N4T4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 RNA5SP413-201ENST00000516373 109 ntBASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms