Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 SMG8-203ENST00000578922 2178 ntBASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 CYP2T1P-201ENST00000432607 1285 ntBASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 AC231657.2-201ENST00000624556 255 ntBASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.18■■□□□ 1.14
ZC3H3Q8IXZ2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 TCF3P1-201ENST00000423021 1937 ntBASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.17■■□□□ 1.14
ZC3H3Q8IXZ2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 MCRIP2P1-201ENST00000394346 511 ntBASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.16■■□□□ 1.14
ZC3H3Q8IXZ2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 DPP3P2-201ENST00000416030 1696 ntBASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZC3H3Q8IXZ2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ZC3H3Q8IXZ2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ZC3H3Q8IXZ2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
ZC3H3Q8IXZ2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ZC3H3Q8IXZ2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZC3H3Q8IXZ2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZC3H3Q8IXZ2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZC3H3Q8IXZ2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.13■■□□□ 1.13
ZC3H3Q8IXZ2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ZC3H3Q8IXZ2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms