Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 AC008694.1-202ENST00000636953 945 ntBASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 AC100791.3-201ENST00000617619 330 ntBASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 AC073111.5-205ENST00000641717 521 ntBASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC65Q8IXS2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 AL356652.1-201ENST00000615962 565 ntBASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC65Q8IXS2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC65Q8IXS2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC65Q8IXS2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CCDC65Q8IXS2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC65Q8IXS2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.58■■□□□ 1.21
CCDC65Q8IXS2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC65Q8IXS2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC65Q8IXS2 AC005181.1-201ENST00000604782 1256 ntBASIC22.58■■□□□ 1.21
CCDC65Q8IXS2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.58■■□□□ 1.21
CCDC65Q8IXS2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CCDC65Q8IXS2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
CCDC65Q8IXS2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCDC65Q8IXS2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
CCDC65Q8IXS2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCDC65Q8IXS2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCDC65Q8IXS2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 MCRIP2P1-201ENST00000394346 511 ntBASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC65Q8IXS2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC65Q8IXS2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC65Q8IXS2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC65Q8IXS2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC65Q8IXS2 CDCA4P2-201ENST00000441182 718 ntBASIC22.56■■□□□ 1.2
CCDC65Q8IXS2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC65Q8IXS2 OR10C1-204ENST00000622521 1039 ntBASIC22.56■■□□□ 1.2
CCDC65Q8IXS2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC65Q8IXS2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC65Q8IXS2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC65Q8IXS2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC65Q8IXS2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms