Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 BX842568.3-201ENST00000418104 571 ntBASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 AC087289.5-201ENST00000586076 3175 ntBASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM42Q8IWZ5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM42Q8IWZ5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM42Q8IWZ5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM42Q8IWZ5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.2■□□□□ 0.83
TRIM42Q8IWZ5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 AC116562.4-201ENST00000641316 2276 ntBASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 EDA-201ENST00000338901 1233 ntBASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 AC053503.5-201ENST00000601508 636 ntBASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 AIRN-201ENST00000601203 4374 ntBASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM42Q8IWZ5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms