Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTN4RL1Q86UN2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 BX088651.1-201ENST00000540551 451 ntBASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 AC113410.3-201ENST00000623366 203 ntBASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 AC244015.2-201ENST00000616358 1861 ntBASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTN4RL1Q86UN2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 AC027702.1-201ENST00000563810 1770 ntBASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
RTN4RL1Q86UN2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 KRT17P2-201ENST00000300992 1314 ntBASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTN4RL1Q86UN2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTN4RL1Q86UN2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTN4RL1Q86UN2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTN4RL1Q86UN2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTN4RL1Q86UN2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTN4RL1Q86UN2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.02■■□□□ 1.12
RTN4RL1Q86UN2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.02■■□□□ 1.12
RTN4RL1Q86UN2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RTN4RL1Q86UN2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
RTN4RL1Q86UN2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RTN4RL1Q86UN2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTN4RL1Q86UN2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.11
RTN4RL1Q86UN2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RTN4RL1Q86UN2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms