Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 MIR1238-201ENST00000408483 83 ntBASIC17.34■□□□□ 0.37
CSMD2Q7Z408 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 AC007322.3-201ENST00000426526 701 ntBASIC17.34■□□□□ 0.37
CSMD2Q7Z408 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSMD2Q7Z408 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CSMD2Q7Z408 AC091076.1-201ENST00000610741 619 ntBASIC17.33■□□□□ 0.37
CSMD2Q7Z408 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.33■□□□□ 0.37
CSMD2Q7Z408 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.33■□□□□ 0.37
CSMD2Q7Z408 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSMD2Q7Z408 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD2Q7Z408 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD2Q7Z408 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD2Q7Z408 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD2Q7Z408 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CSMD2Q7Z408 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.33■□□□□ 0.36
CSMD2Q7Z408 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSMD2Q7Z408 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CSMD2Q7Z408 HTR7P1-201ENST00000538670 1336 ntBASIC17.32■□□□□ 0.36
CSMD2Q7Z408 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD2Q7Z408 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD2Q7Z408 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CSMD2Q7Z408 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.32■□□□□ 0.36
CSMD2Q7Z408 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.32■□□□□ 0.36
CSMD2Q7Z408 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD2Q7Z408 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD2Q7Z408 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD2Q7Z408 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD2Q7Z408 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD2Q7Z408 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSMD2Q7Z408 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 AC010203.1-204ENST00000548782 407 ntBASIC17.31■□□□□ 0.36
CSMD2Q7Z408 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 KRT16P5-201ENST00000455284 522 ntBASIC17.31■□□□□ 0.36
CSMD2Q7Z408 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CSMD2Q7Z408 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 AL450487.1-201ENST00000426799 995 ntBASIC17.3■□□□□ 0.36
CSMD2Q7Z408 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 BX664615.1-201ENST00000443558 458 ntBASIC17.3■□□□□ 0.36
CSMD2Q7Z408 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.3■□□□□ 0.36
CSMD2Q7Z408 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD2Q7Z408 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD2Q7Z408 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.29■□□□□ 0.36
CSMD2Q7Z408 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD2Q7Z408 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CSMD2Q7Z408 AC022616.7-201ENST00000525383 220 ntBASIC17.29■□□□□ 0.36
CSMD2Q7Z408 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.29■□□□□ 0.36
CSMD2Q7Z408 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.29■□□□□ 0.36
CSMD2Q7Z408 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD2Q7Z408 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD2Q7Z408 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CSMD2Q7Z408 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms