Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC133552.2-202ENST00000575694 574 ntBASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 AC005181.1-201ENST00000604782 1256 ntBASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 AC008694.1-202ENST00000636953 945 ntBASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.57■□□□□ 0.4
COLCA1Q6ZS62 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 AL512408.1-201ENST00000569378 2000 ntBASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COLCA1Q6ZS62 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 AC026185.1-201ENST00000445748 174 ntBASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 AC010980.2-201ENST00000587099 1412 ntBASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COLCA1Q6ZS62 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 KRT18P68-201ENST00000392293 1000 ntBASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 CYP2T3P-201ENST00000601990 817 ntBASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COLCA1Q6ZS62 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 AL050303.2-201ENST00000619798 666 ntBASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.53■□□□□ 0.4
COLCA1Q6ZS62 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COLCA1Q6ZS62 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms