Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 AC093787.1-201ENST00000450396 207 ntBASIC19.03■□□□□ 0.64
RTL4Q6ZR62 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTL4Q6ZR62 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL4Q6ZR62 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL4Q6ZR62 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL4Q6ZR62 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL4Q6ZR62 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL4Q6ZR62 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.02■□□□□ 0.64
RTL4Q6ZR62 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.02■□□□□ 0.64
RTL4Q6ZR62 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.02■□□□□ 0.64
RTL4Q6ZR62 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.02■□□□□ 0.64
RTL4Q6ZR62 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.02■□□□□ 0.64
RTL4Q6ZR62 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
RTL4Q6ZR62 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
RTL4Q6ZR62 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RTL4Q6ZR62 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 AL138781.1-201ENST00000566567 1274 ntBASIC19.01■□□□□ 0.63
RTL4Q6ZR62 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.01■□□□□ 0.63
RTL4Q6ZR62 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL4Q6ZR62 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19■□□□□ 0.63
RTL4Q6ZR62 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RTL4Q6ZR62 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RTL4Q6ZR62 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL4Q6ZR62 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19■□□□□ 0.63
RTL4Q6ZR62 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19■□□□□ 0.63
RTL4Q6ZR62 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RTL4Q6ZR62 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19■□□□□ 0.63
RTL4Q6ZR62 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL4Q6ZR62 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RTL4Q6ZR62 MIPEPP3-201ENST00000412105 444 ntBASIC19■□□□□ 0.63
RTL4Q6ZR62 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RTL4Q6ZR62 AC007322.3-201ENST00000426526 701 ntBASIC19■□□□□ 0.63
RTL4Q6ZR62 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19■□□□□ 0.63
RTL4Q6ZR62 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19■□□□□ 0.63
RTL4Q6ZR62 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL4Q6ZR62 MIR4758-201ENST00000577688 71 ntBASIC19■□□□□ 0.63
RTL4Q6ZR62 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19■□□□□ 0.63
RTL4Q6ZR62 MARS-234ENST00000630571 216 ntTSL 5 BASIC19■□□□□ 0.63
RTL4Q6ZR62 MARS-235ENST00000630803 183 ntTSL 3 BASIC19■□□□□ 0.63
RTL4Q6ZR62 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19■□□□□ 0.63
RTL4Q6ZR62 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RTL4Q6ZR62 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTL4Q6ZR62 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTL4Q6ZR62 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19■□□□□ 0.63
RTL4Q6ZR62 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.99■□□□□ 0.63
RTL4Q6ZR62 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RTL4Q6ZR62 AC133041.1-202ENST00000642053 222 ntBASIC18.99■□□□□ 0.63
RTL4Q6ZR62 AIRN-201ENST00000601203 4374 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms